STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdh_1Serine 3-dehydrogenase. (274 aa)    
Predicted Functional Partners:
AMO58951.1
Hypothetical protein.
  
    0.805
AMO58950.1
Hypothetical protein.
  
    0.802
AMO58954.1
Fructosamine kinase.
       0.791
AMO58947.1
Mce related protein.
       0.773
AMO58948.1
Hypothetical protein.
       0.773
AMO58949.1
RDD family protein.
       0.773
AMO58952.1
Hypothetical protein.
       0.770
AMO58946.1
Mce related protein.
       0.762
kasA_1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.715
fabG_7
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.670
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.