STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erpExported repetitive protein precursor. (309 aa)    
Predicted Functional Partners:
AMO63980.1
Hypothetical protein.
 
 0.849
AMO63508.1
Hypothetical protein.
 
    0.773
AMO62470.1
Membrane protein.
  
     0.765
AMO59181.1
Hypothetical protein.
 
     0.744
rsdA
Anti-sigma-D factor RsdA.
 
 0.731
AMO63541.1
Hypothetical protein.
  
     0.725
AMO61956.1
Hypothetical protein.
  
     0.705
AMO63309.1
Hypothetical protein.
  
     0.701
eccB1_3
ESX-1 secretion system protein eccB1.
 
 0.697
AMO63770.1
Hypothetical protein.
 
  
 0.686
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.