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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egtBIron(II)-dependent oxidoreductase EgtB. (431 aa)    
Predicted Functional Partners:
egtC
Amidohydrolase EgtC.
 
 
 0.999
egtD
Histidine-specific methyltransferase EgtD.
 
 0.999
gshA
Glutamate--cysteine ligase GshA.
 
 
 0.997
egtE
Pyridoxal-phosphate-dependent protein EgtE.
  
  
 0.979
tldD
Protease TldD.
 
   
 0.843
AMO61747.1
Orotidine 5'-phosphate decarboxylase.
     
 0.822
lpdA
NAD(P)H dehydrogenase (quinone).
     
 0.821
end
Putative endonuclease 4.
     
 0.818
cobM
Precorrin-4 C(11)-methyltransferase.
     
 0.817
AMO60110.1
Amidinotransferase.
      
 0.800
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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