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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO59323.1Phosphotransferase enzyme family protein. (309 aa)    
Predicted Functional Partners:
otsB
Trehalose-phosphate phosphatase.
       0.773
kstR_1
HTH-type transcriptional repressor KstR.
       0.773
AMO63591.1
STAS domain protein.
  
    0.605
AMO61458.1
Hypothetical protein.
  
     0.593
rsbU_2
Phosphoserine phosphatase RsbU.
 
    0.502
bbsG_1
(R)-benzylsuccinyl-CoA dehydrogenase.
       0.498
tmoS
Sensor histidine kinase TmoS.
 
    0.452
vgb_5
Virginiamycin B lyase.
  
     0.430
subB_2
Ferredoxin-2.
  
     0.429
AMO60142.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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