STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rutA_2Pyrimidine monooxygenase RutA. (288 aa)    
Predicted Functional Partners:
AMO59422.1
SnoaL-like domain protein.
  
     0.707
fgd1_1
F420-dependent glucose-6-phosphate dehydrogenase.
 
     0.704
AMO60552.1
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
  
   
 0.656
ddn_1
Deazaflavin-dependent nitroreductase.
  
   
 0.624
AMO59484.1
Nuclear transport factor 2 (NTF2) domain protein.
  
     0.584
hsaA_6
Flavin-dependent monooxygenase, oxygenase subunit HsaA.
 
    0.572
fgd1_3
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.571
fgd1_4
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.563
AMO59734.1
Hypothetical protein.
       0.556
AMO59426.1
Hypothetical protein.
 
   
 0.552
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (18%) [HD]