STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO59875.1Putative nitroreductase. (137 aa)    
Predicted Functional Partners:
cofD
2-phospho-L-lactate transferase.
 
   
 0.831
fgd_8
F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
   
 0.807
AMO63966.1
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
  
   
 0.766
fbiB_3
Coenzyme F420:L-glutamate ligase.
 
   
 0.762
fgd1_1
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.740
fgd_1
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.736
rutA_7
Pyrimidine monooxygenase RutA.
  
   
 0.730
fgd1_3
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.717
cofC
2-phospho-L-lactate guanylyltransferase.
 
   
 0.717
fgd_5
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.677
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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