STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galTGalactose-1-phosphate uridylyltransferase. (364 aa)    
Predicted Functional Partners:
galK
Galactokinase.
 0.999
galE_1
UDP-glucose 4-epimerase.
 
 0.994
galM
Aldose 1-epimerase.
 
 
 0.924
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.914
galE_3
UDP-glucose 4-epimerase.
  
 
 0.911
galE_4
UDP-glucose 4-epimerase.
  
 
 0.911
glf
UDP-galactopyranose mutase.
    
 0.910
ywqF_1
UDP-glucose 6-dehydrogenase YwqF.
   
 0.836
xylG_1
Xylose import ATP-binding protein XylG.
       0.769
xylH_2
Xylose transport system permease protein XylH.
       0.767
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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