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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpBPentachlorophenol 4-monooxygenase. (482 aa)    
Predicted Functional Partners:
AMO60559.1
Bacterial regulatory protein, tetR family.
   
 
 0.812
pks2
Phthioceranic/hydroxyphthioceranic acid synthase.
 
 0.643
eryA_3
Erythronolide synthase, modules 1 and 2.
 
 0.643
echA8_6
Putative enoyl-CoA hydratase echA8.
   
 
 0.630
ethA_1
FAD-containing monooxygenase EthA.
  
 
 0.623
eryA_1
Erythronolide synthase, modules 5 and 6.
 
 0.589
AMO62149.1
Hypothetical protein.
   
 0.578
AMO61151.1
Fatty acid hydroxylase superfamily protein.
   
 
 0.560
AMO61262.1
Fatty acid hydroxylase superfamily protein.
   
 
 0.560
AMO63597.1
Fatty acid hydroxylase superfamily protein.
   
 
 0.560
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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