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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO60805.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
AMO60806.1
Hypothetical protein.
       0.773
ylmA_1
Putative ABC transporter ATP-binding protein YlmA.
       0.741
AMO60808.1
NUDIX domain protein.
       0.741
AMO60809.1
Putative enoyl-CoA hydratase echA17.
       0.741
rebM_2
Demethylrebeccamycin-D-glucose O-methyltransferase.
       0.721
ydcR
Putative HTH-type transcriptional regulator YdcR.
       0.557
AMO60811.1
Hypothetical protein.
       0.448
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.