STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsTAmino-acid carrier protein AlsT. (166 aa)    
Predicted Functional Partners:
putP
Sodium/proline symporter.
  
  
 0.636
plaP_1
Low-affinity putrescine importer PlaP.
  
  
 0.600
clcA
H(+)/Cl(-) exchange transporter ClcA.
  
    0.518
AMO60824.1
Hypothetical protein.
       0.480
pksJ
Polyketide synthase PksJ.
  
   0.431
prpC2
2-methylcitrate synthase 2; Belongs to the citrate synthase family.
  
  
 0.419
citA
Citrate synthase 1; Belongs to the citrate synthase family.
  
  
 0.419
gltA2
Citrate synthase 1; Belongs to the citrate synthase family.
  
  
 0.419
AMO59418.1
Sodium/panthothenate symporter.
   
  
 0.415
sglT
Sodium/glucose cotransporter.
   
  
 0.415
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.