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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kstR2_6HTH-type transcriptional repressor KstR2. (429 aa)    
Predicted Functional Partners:
AMO60950.1
Hypothetical protein.
 
     0.829
AMO63572.1
Hypothetical protein.
 
     0.774
AMO62594.1
Amidohydrolase.
 
     0.723
fabG_5
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
     0.721
mhpC_1
2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase.
 
    0.713
AMO62528.1
Hypothetical protein.
  
     0.709
AMO61807.1
Bacterial regulatory protein, tetR family.
  
     0.693
AMO60996.1
Phosphotransferase enzyme family protein.
 
     0.685
AMO63240.1
Hypothetical protein.
  
     0.673
betI_7
HTH-type transcriptional regulator BetI.
  
     0.671
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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