STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO60969.1Hypothetical protein. (374 aa)    
Predicted Functional Partners:
comM
Competence protein ComM.
 
 0.979
AMO60967.1
Hypothetical protein.
 
    0.904
pyrE_1
Orotate phosphoribosyltransferase.
 
 
 0.801
tmoS
Sensor histidine kinase TmoS.
  
  
 0.797
AMO62359.1
Competence protein.
 
  
 0.761
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
 
 0.739
AMO61775.1
Type IV leader peptidase family protein.
  
  
 0.715
soj_1
Sporulation initiation inhibitor protein Soj.
  
  
 0.652
soj_3
Sporulation initiation inhibitor protein Soj.
  
  
 0.652
soj_2
Sporulation initiation inhibitor protein Soj.
  
  
 0.649
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.