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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadCPutative glutamate/gamma-aminobutyrate antiporter. (503 aa)    
Predicted Functional Partners:
maoII
Copper methylamine oxidase precursor.
    
 0.810
macB
Macrolide export ATP-binding/permease protein MacB.
     
 0.743
AMO60983.1
FtsX-like permease family protein.
       0.731
AMO60982.1
FtsX-like permease family protein.
       0.723
nplT
Neopullulanase.
  
 0.679
treA
Trehalose-6-phosphate hydrolase.
  
 0.679
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase.
  
 0.679
treS
Trehalose synthase/amylase TreS.
  
 0.679
nylA_1
6-aminohexanoate-cyclic-dimer hydrolase.
   
 
 0.596
gadB
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
 
  
 0.535
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.