STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yccS_2Inner membrane protein YccS. (656 aa)    
Predicted Functional Partners:
AMO58955.1
Hypothetical protein.
  
     0.753
ethR_6
HTH-type transcriptional regulator EthR.
 
    0.749
AMO62869.1
Hypothetical protein.
 
     0.747
AMO60611.1
Hypothetical protein.
  
     0.727
mshD_4
Mycothiol acetyltransferase.
 
     0.704
AMO63795.1
Hypothetical protein.
 
   
 0.668
AMO60096.1
Hypothetical protein.
 
     0.664
AMO62346.1
Hypothetical protein.
  
     0.652
nifU
NifU-like protein.
   
    0.646
espA
ESX-1 secretion-associated protein EspA.
  
     0.642
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.