STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO61233.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
AMO61234.1
Amidohydrolase.
     0.990
glnA_3
Glutamine synthetase.
 
   
 0.922
AMO61231.1
Carboxymuconolactone decarboxylase family protein.
       0.686
bmr3_1
Multidrug resistance protein 3.
       0.604
bfr
Bacterioferritin.
  
    0.469
AMO63897.1
Permease for cytosine/purine, uracil, thiamine, allantoin.
 
     0.457
AMO59428.1
Acetoacetate decarboxylase.
 
     0.449
AMO59988.1
Hypothetical protein.
  
     0.441
AMO62492.1
Hypothetical protein.
  
   0.426
betC
Choline-sulfatase.
 
 
 0.415
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.