STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srrATranscriptional regulatory protein SrrA. (171 aa)    
Predicted Functional Partners:
tmoS
Sensor histidine kinase TmoS.
  
 
 0.834
senX3
Signal-transduction histidine kinase senX3.
 
 
 0.792
arlS
Signal transduction histidine-protein kinase ArlS.
 
 
 0.750
tcrY_1
Putative sensor histidine kinase TcrY.
 
 
 0.748
tcrY_2
Putative sensor histidine kinase TcrY.
 
 
 0.713
prrB_3
Sensor-type histidine kinase PrrB.
 
 
 0.695
tcrY_3
Putative sensor histidine kinase TcrY.
 
 
 0.685
mtrB
Sensor histidine kinase MtrB.
 
 
 0.662
prrA_2
Transcriptional regulatory protein PrrA.
  
     0.662
prrB_2
Sensor-type histidine kinase PrrB.
 
 
 0.651
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.