STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlhH_4Carboxylesterase NlhH. (319 aa)    
Predicted Functional Partners:
nlhH_11
Carboxylesterase NlhH.
  
     0.753
nlhH_12
Carboxylesterase NlhH.
 
   
 0.731
pks2
Phthioceranic/hydroxyphthioceranic acid synthase.
  
 0.666
eryA_3
Erythronolide synthase, modules 1 and 2.
  
 0.666
ppsA_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
  
 0.661
eryA_1
Erythronolide synthase, modules 5 and 6.
  
 0.632
AMO62149.1
Hypothetical protein.
   
 0.586
nqo3
NADH-quinone oxidoreductase subunit 3.
   
 0.577
nqo9
NADH-quinone oxidoreductase subunit 9; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.576
AMO60052.1
Aminoacyl carrier protein.
   
 0.564
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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