STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO61251.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AMO61252.1
Hypothetical protein.
       0.773
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
  
     0.590
nadB_2
L-aspartate oxidase.
  
     0.562
AMO59475.1
Hypothetical protein.
  
     0.501
mmaA2_2
Cyclopropane mycolic acid synthase MmaA2.
       0.491
AMO60761.1
ANTAR domain protein.
  
     0.478
scnB
Thiocyanate hydrolase subunit beta.
  
     0.473
srmB_2
ATP-dependent RNA helicase SrmB.
  
     0.447
AMO61231.1
Carboxymuconolactone decarboxylase family protein.
  
     0.430
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
       0.429
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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