STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO61260.1Hypothetical protein. (459 aa)    
Predicted Functional Partners:
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
    0.662
erp
Exported repetitive protein precursor.
  
 0.558
AMO59051.1
Cutinase.
  
 0.558
AMO59632.1
Hypothetical protein.
  
 0.558
AMO59891.1
Hypothetical protein.
  
 0.558
AMO59892.1
Hypothetical protein.
  
 0.558
AMO60035.1
Putative PPE family protein PPE42.
  
 0.558
AMO62433.1
Hypothetical protein.
  
 0.558
AMO62730.1
Cellulase (glycosyl hydrolase family 5).
  
 0.558
AMO63314.1
Hypothetical protein.
  
 0.558
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.