STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO61264.1SnoaL-like domain protein. (123 aa)    
Predicted Functional Partners:
AMO61265.1
Lipoprotein antigen.
       0.773
AMO61266.1
Carboxymuconolactone decarboxylase family protein.
       0.635
AMO61262.1
Fatty acid hydroxylase superfamily protein.
       0.611
mce2R
HTH-type transcriptional regulator Mce2R.
       0.611
AMO61267.1
Helix-turn-helix protein.
 
     0.603
AMO59090.1
NADH oxidase.
     
 0.547
AMO60310.1
NADH oxidase.
     
 0.547
AMO61435.1
NADH oxidase.
     
 0.547
catE
Catechol-2,3-dioxygenase.
 
    0.497
AMO62485.1
MerR family regulatory protein.
 
   
 0.482
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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