STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bm3R1_3HTH-type transcriptional repressor Bm3R1. (218 aa)    
Predicted Functional Partners:
mmpL8_5
Membrane transport protein mmpL8.
  
  
 0.775
kstR2_5
HTH-type transcriptional repressor KstR2.
  
    0.773
mmpS4_2
Putative membrane protein mmpS4.
     
 0.772
AMO62074.1
Bacterial regulatory protein, tetR family.
  
  
 0.669
kstR_3
HTH-type transcriptional repressor KstR.
  
     0.544
AMO63352.1
Bacterial regulatory protein, tetR family.
  
  
 0.543
ykuT
Putative MscS family protein YkuT.
     
 0.542
AMO62946.1
Bacterial regulatory protein, tetR family.
  
  
 0.537
AMO60275.1
Hypothetical protein.
      
 0.530
oppB_2
Oligopeptide transport system permease protein OppB.
     
 0.530
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.