STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opuCCGlycine betaine/carnitine/choline-binding protein OpuCC precursor. (317 aa)    
Predicted Functional Partners:
opuBB_3
Choline transport system permease protein OpuBB.
 
 0.999
opuCD
Carnitine transport permease protein OpuCD.
 
 0.999
osmF
Putative osmoprotectant uptake system substrate-binding protein OsmF precursor.
  
  
 
0.998
opuBB_2
Choline transport system permease protein OpuBB.
 
 0.998
opuCA_2
Carnitine transport ATP-binding protein OpuCA.
 
 0.997
opuCA_1
Carnitine transport ATP-binding protein OpuCA.
 
 0.990
opuBB_1
Choline transport system permease protein OpuBB.
 
 0.988
pstS3
Phosphate-binding protein PstS 3 precursor.
  
 
 0.982
potA_1
Spermidine/putrescine import ATP-binding protein PotA.
  
 
  0.981
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2.
  
 
  0.980
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.