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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO61389.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
nanR
Transcriptional regulator NanR.
  
    0.793
gntK
Thermoresistant gluconokinase.
       0.553
AMO63576.1
Nitroreductase family protein.
 
    0.549
ynfA
Hypothetical protein.
       0.547
AMO59804.1
Hypothetical protein.
 
   
 0.519
AMO61231.1
Carboxymuconolactone decarboxylase family protein.
 
     0.515
AMO63733.1
Hypothetical protein.
 
   
 0.514
ygbN_1
Inner membrane permease YgbN.
       0.511
AMO59806.1
Hypothetical protein.
 
   
 0.499
AMO63405.1
Hypothetical protein.
 
     0.469
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.