STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDATP-binding/permease protein CydD. (525 aa)    
Predicted Functional Partners:
cydB
Cytochrome bd-I ubiquinol oxidase subunit 2.
 
  
 0.999
AMO61597.1
Putative ABC transporter ATP-binding protein.
 
0.999
appC
Cytochrome bd-II ubiquinol oxidase subunit 1.
 
  
 0.996
AMO61598.1
Hypothetical protein.
       0.773
AMO61593.1
Acid-resistance membrane protein.
       0.752
kasA
3-oxoacyl-[acyl-carrier-protein] synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.616
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2.
 
   
 
0.553
tcyC_2
L-cystine import ATP-binding protein TcyC.
   
 
0.534
metN
Methionine import ATP-binding protein MetN.
  
  0.506
glnH_2
Glutamine-binding periplasmic protein precursor.
    
  0.496
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.