STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cldChlorite dismutase precursor. (231 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase.
  
 0.962
hemY
Protoporphyrinogen oxidase.
 
  
 0.940
hemE
Uroporphyrinogen decarboxylase.
 
  
 0.930
AMO61888.1
Hypothetical protein.
 
     0.793
rnd
Ribonuclease D.
 
     0.691
AMO61884.1
Hypothetical protein.
       0.668
whiA
Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation.
 
     0.584
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
   
 0.584
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.574
AMO61909.1
Hypothetical protein.
  
     0.551
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.