STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62105.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.703
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
     0.685
AMO62088.1
YGGT family protein.
 
     0.672
AMO62106.1
Hypothetical protein.
 
     0.663
aioB
Arsenite oxidase subunit AioB precursor.
  
     0.662
AMO61888.1
Hypothetical protein.
  
     0.633
AMO61918.1
Hypothetical protein.
  
     0.600
AMO62206.1
Hypothetical protein.
  
     0.561
pmt
Putative dolichyl-phosphate-mannose--protein mannosyltransferase.
  
   
 0.553
AMO60516.1
Hypothetical protein.
  
     0.526
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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