STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sadH_5Putative oxidoreductase SadH. (589 aa)    
Predicted Functional Partners:
eryA_3
Erythronolide synthase, modules 1 and 2.
 
 0.984
pks2
Phthioceranic/hydroxyphthioceranic acid synthase.
  
 0.980
eryA_1
Erythronolide synthase, modules 5 and 6.
  
 0.910
ppsA_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
  
 0.903
aceF
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.751
AMO61143.1
Putative metal-dependent hydrolase.
 
     0.733
AMO62149.1
Hypothetical protein.
   
 
 0.718
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
  
 0.623
AMO59451.1
Hypothetical protein.
 
 0.622
AMO62151.1
Epimerase family protein.
  
  
 0.619
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.