STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62156.1RDD family protein. (151 aa)    
Predicted Functional Partners:
crgA
Cell division protein CrgA; Involved in cell division; Belongs to the CrgA family.
  
     0.711
glnA_4
Glutamine synthetase 1.
  
 
 0.711
AMO62088.1
YGGT family protein.
  
     0.568
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
     0.533
AMO62110.1
DNA-binding protein.
  
     0.518
AMO61708.1
Glucose-6-phosphate dehydrogenase subunit.
  
     0.502
AMO62667.1
Hypothetical protein.
 
     0.454
ccs1
Cytochrome c biogenesis protein Ccs1.
  
     0.454
AMO60022.1
Hypothetical protein.
  
    0.453
AMO63284.1
Hypothetical protein.
  
    0.453
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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