STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62214.1Hypothetical protein; Dihydrodipicolinate reductase, N-terminus. (362 aa)    
Predicted Functional Partners:
dnaK_2
Chaperone protein DnaK.
       0.740
AMO62216.1
Hypothetical protein.
       0.678
AMO62215.1
Hypothetical protein.
       0.664
AMO63571.1
Hypothetical protein; Dihydrodipicolinate reductase, N-terminus.
  
  
 
0.623
baiE_2
Bile acid 7-alpha dehydratase.
  
     0.533
baiE_1
Bile acid 7-alpha dehydratase.
  
     0.525
baiE_3
Bile acid 7-alpha dehydratase.
  
     0.513
AMO63240.1
Hypothetical protein.
  
     0.501
dapA_2
4-hydroxy-tetrahydrodipicolinate synthase.
     
  0.499
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
     
  0.499
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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