STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62216.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
otsB
Trehalose-phosphate phosphatase.
  
  
 0.819
AMO62215.1
Hypothetical protein.
       0.782
AMO62214.1
Hypothetical protein; Dihydrodipicolinate reductase, N-terminus.
       0.678
dnaK_2
Chaperone protein DnaK.
     
 0.650
AMO61991.1
Hypothetical protein.
      
 0.583
AMO58948.1
Hypothetical protein.
      
 0.582
gsiA_3
Glutathione import ATP-binding protein GsiA.
     
 0.560
dppA_1
Periplasmic dipeptide transport protein precursor.
       0.554
dppB_1
Dipeptide transport system permease protein DppB.
       0.554
gsiD_2
Glutathione transport system permease protein GsiD.
       0.554
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.