STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_123-oxoacyl-[acyl-carrier-protein] reductase FabG. (246 aa)    
Predicted Functional Partners:
AMO59401.1
MaoC like domain protein.
 
 0.938
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
  
 
0.922
hsdA_3
3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase.
  
     0.768
hsdA_4
3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase.
  
     0.728
kasA_1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.710
pks2
Phthioceranic/hydroxyphthioceranic acid synthase.
  
 0.671
eryA_3
Erythronolide synthase, modules 1 and 2.
  
 0.671
betC
Choline-sulfatase.
  
 0.658
AMO59677.1
Putative short-chain type dehydrogenase/reductase.
 
    
0.657
ppsA_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
  
 0.654
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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