STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62229.1Transglycosylase SLT domain protein. (314 aa)    
Predicted Functional Partners:
AMO59216.1
Hypothetical protein.
 
   
 0.597
AMO62941.1
Hypothetical protein.
 
     0.568
AMO62227.1
Hypothetical protein.
       0.556
bbsG_2
(R)-benzylsuccinyl-CoA dehydrogenase.
       0.556
AMO62230.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
  
 0.538
AMO63947.1
Hypothetical protein.
  
     0.486
AMO62840.1
Hypothetical protein.
  
     0.473
AMO61775.1
Type IV leader peptidase family protein.
 
     0.462
AMO58952.1
Hypothetical protein.
 
     0.439
slmA_2
Nucleoid occlusion factor SlmA.
 
     0.439
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.