STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62230.1Type I phosphodiesterase / nucleotide pyrophosphatase. (692 aa)    
Predicted Functional Partners:
dadA_2
D-amino acid dehydrogenase small subunit.
 
  
  0.596
AMO63890.1
Hypothetical protein.
 
    0.579
AMO62229.1
Transglycosylase SLT domain protein.
  
  
 0.538
atpE
ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
     
 0.512
bbsG_2
(R)-benzylsuccinyl-CoA dehydrogenase.
  
  0.506
mntH
Divalent metal cation transporter MntH.
   
 0.485
phnX
Phosphonoacetaldehyde hydrolase.
 
     0.474
cysW_3
Sulfate transport system permease protein CysW.
  
    0.468
atsA
Arylsulfatase.
 
  
 0.456
AMO62778.1
Hypothetical protein.
 
  
 0.422
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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