Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMO62242.1Putative modulator of DNA gyrase. (457 aa)    
Predicted Functional Partners:
tldD
Protease TldD.
 
     0.967
AMO62241.1
Hypothetical protein.
     
 0.868
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT.
       0.710
ecfA2
Energy-coupling factor transporter ATP-binding protein EcfA2.
       0.705
AMO61682.1
Hypothetical protein.
  
     0.643
AMO62246.1
MarR family protein.
     
 0.500
desA1_2
Putative acyl-[acyl-carrier-protein] desaturase desA1.
 
   
 0.438
desA1_1
Putative acyl-[acyl-carrier-protein] desaturase desA1.
 
   
 0.433
desA2
Putative acyl-[acyl-carrier-protein] desaturase desA2.
 
   
 0.427
AMO61180.1
Peptidase family M48.
 
   
 0.420
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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