STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfmOMultidrug efflux protein YfmO. (401 aa)    
Predicted Functional Partners:
AMO62246.1
MarR family protein.
 
   
 0.835
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT.
  
    0.488
ecfA2
Energy-coupling factor transporter ATP-binding protein EcfA2.
  
  
 0.485
AMO62685.1
Carbohydrate phosphorylase.
 
    0.484
bmr3_1
Multidrug resistance protein 3.
  
  
 0.482
AMO61900.1
Hypothetical protein.
  
   
 0.457
AMO61482.1
Bacterial regulatory protein, tetR family.
 
  
 0.436
czrA
HTH-type transcriptional repressor CzrA.
  
  
 0.419
AMO62242.1
Putative modulator of DNA gyrase.
       0.411
tldD
Protease TldD.
       0.411
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.