Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMO62267.1 | corC_2 | MPHLCCUG_03466 | MPHLCCUG_03467 | Hypothetical protein. | Magnesium and cobalt efflux protein CorC. | 0.968 |
| AMO62267.1 | era | MPHLCCUG_03466 | MPHLCCUG_03465 | Hypothetical protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.966 |
| AMO62267.1 | ybeY | MPHLCCUG_03466 | MPHLCCUG_03468 | Hypothetical protein. | Endoribonuclease YbeY. | 0.961 |
| AMO62267.1 | ybeZ_1 | MPHLCCUG_03466 | MPHLCCUG_03469 | Hypothetical protein. | PhoH-like protein. | 0.919 |
| corC_2 | AMO62267.1 | MPHLCCUG_03467 | MPHLCCUG_03466 | Magnesium and cobalt efflux protein CorC. | Hypothetical protein. | 0.968 |
| corC_2 | era | MPHLCCUG_03467 | MPHLCCUG_03465 | Magnesium and cobalt efflux protein CorC. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.967 |
| corC_2 | ybeY | MPHLCCUG_03467 | MPHLCCUG_03468 | Magnesium and cobalt efflux protein CorC. | Endoribonuclease YbeY. | 0.970 |
| corC_2 | ybeZ_1 | MPHLCCUG_03467 | MPHLCCUG_03469 | Magnesium and cobalt efflux protein CorC. | PhoH-like protein. | 0.961 |
| era | AMO62267.1 | MPHLCCUG_03465 | MPHLCCUG_03466 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein. | 0.966 |
| era | corC_2 | MPHLCCUG_03465 | MPHLCCUG_03467 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Magnesium and cobalt efflux protein CorC. | 0.967 |
| era | rpsF | MPHLCCUG_03465 | MPHLCCUG_05172 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.938 |
| era | rpsG | MPHLCCUG_03465 | MPHLCCUG_01273 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.905 |
| era | rpsI | MPHLCCUG_03465 | MPHLCCUG_01401 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.895 |
| era | rpsP | MPHLCCUG_03465 | MPHLCCUG_02108 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.946 |
| era | rpsZ | MPHLCCUG_03465 | MPHLCCUG_01336 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.878 |
| era | scpA_1 | MPHLCCUG_03465 | MPHLCCUG_02282 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Segregation and condensation protein A. | 0.897 |
| era | ybeY | MPHLCCUG_03465 | MPHLCCUG_03468 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Endoribonuclease YbeY. | 0.969 |
| era | ybeZ_1 | MPHLCCUG_03465 | MPHLCCUG_03469 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | PhoH-like protein. | 0.937 |
| rpsF | era | MPHLCCUG_05172 | MPHLCCUG_03465 | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.938 |
| rpsF | rpsG | MPHLCCUG_05172 | MPHLCCUG_01273 | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
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