Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMO62267.1 | corC_2 | MPHLCCUG_03466 | MPHLCCUG_03467 | Hypothetical protein. | Magnesium and cobalt efflux protein CorC. | 0.968 |
| AMO62267.1 | era | MPHLCCUG_03466 | MPHLCCUG_03465 | Hypothetical protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.966 |
| AMO62267.1 | ybeY | MPHLCCUG_03466 | MPHLCCUG_03468 | Hypothetical protein. | Endoribonuclease YbeY. | 0.961 |
| AMO62267.1 | ybeZ_1 | MPHLCCUG_03466 | MPHLCCUG_03469 | Hypothetical protein. | PhoH-like protein. | 0.919 |
| blh | rplM | MPHLCCUG_03503 | MPHLCCUG_01400 | Beta-lactamase hydrolase-like protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.447 |
| blh | rplQ | MPHLCCUG_03503 | MPHLCCUG_01379 | Beta-lactamase hydrolase-like protein. | 50S ribosomal protein L17. | 0.425 |
| blh | rplU | MPHLCCUG_03503 | MPHLCCUG_03594 | Beta-lactamase hydrolase-like protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.427 |
| blh | rpsQ | MPHLCCUG_03503 | MPHLCCUG_01313 | Beta-lactamase hydrolase-like protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.890 |
| blh | sodA | MPHLCCUG_03503 | MPHLCCUG_00560 | Beta-lactamase hydrolase-like protein. | Superoxide dismutase (Mn); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. | 0.560 |
| blh | ybeY | MPHLCCUG_03503 | MPHLCCUG_03468 | Beta-lactamase hydrolase-like protein. | Endoribonuclease YbeY. | 0.911 |
| corC_2 | AMO62267.1 | MPHLCCUG_03467 | MPHLCCUG_03466 | Magnesium and cobalt efflux protein CorC. | Hypothetical protein. | 0.968 |
| corC_2 | era | MPHLCCUG_03467 | MPHLCCUG_03465 | Magnesium and cobalt efflux protein CorC. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.967 |
| corC_2 | ybeY | MPHLCCUG_03467 | MPHLCCUG_03468 | Magnesium and cobalt efflux protein CorC. | Endoribonuclease YbeY. | 0.970 |
| corC_2 | ybeZ_1 | MPHLCCUG_03467 | MPHLCCUG_03469 | Magnesium and cobalt efflux protein CorC. | PhoH-like protein. | 0.961 |
| era | AMO62267.1 | MPHLCCUG_03465 | MPHLCCUG_03466 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein. | 0.966 |
| era | corC_2 | MPHLCCUG_03465 | MPHLCCUG_03467 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Magnesium and cobalt efflux protein CorC. | 0.967 |
| era | ybeY | MPHLCCUG_03465 | MPHLCCUG_03468 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Endoribonuclease YbeY. | 0.969 |
| era | ybeZ_1 | MPHLCCUG_03465 | MPHLCCUG_03469 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | PhoH-like protein. | 0.937 |
| rplM | blh | MPHLCCUG_01400 | MPHLCCUG_03503 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Beta-lactamase hydrolase-like protein. | 0.447 |
| rplM | rplQ | MPHLCCUG_01400 | MPHLCCUG_01379 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L17. | 0.998 |
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