Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaJ_1 | era | MPHLCCUG_03471 | MPHLCCUG_03465 | Chaperone protein DnaJ. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.602 |
| dnaJ_1 | hrcA | MPHLCCUG_03471 | MPHLCCUG_03472 | Chaperone protein DnaJ. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.935 |
| dnaJ_1 | rsmB | MPHLCCUG_03471 | MPHLCCUG_02925 | Chaperone protein DnaJ. | Ribosomal RNA small subunit methyltransferase B. | 0.475 |
| dnaJ_1 | rsmE | MPHLCCUG_03471 | MPHLCCUG_03470 | Chaperone protein DnaJ. | Ribosomal RNA small subunit methyltransferase E. | 0.915 |
| dnaJ_1 | ybeY | MPHLCCUG_03471 | MPHLCCUG_03468 | Chaperone protein DnaJ. | Endoribonuclease YbeY. | 0.807 |
| dnaJ_1 | ybeZ_1 | MPHLCCUG_03471 | MPHLCCUG_03469 | Chaperone protein DnaJ. | PhoH-like protein. | 0.587 |
| era | dnaJ_1 | MPHLCCUG_03465 | MPHLCCUG_03471 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Chaperone protein DnaJ. | 0.602 |
| era | hrcA | MPHLCCUG_03465 | MPHLCCUG_03472 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.578 |
| era | rsmB | MPHLCCUG_03465 | MPHLCCUG_02925 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Ribosomal RNA small subunit methyltransferase B. | 0.517 |
| era | rsmE | MPHLCCUG_03465 | MPHLCCUG_03470 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Ribosomal RNA small subunit methyltransferase E. | 0.625 |
| era | rsmH | MPHLCCUG_03465 | MPHLCCUG_03299 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Ribosomal RNA small subunit methyltransferase H. | 0.458 |
| era | rsmI | MPHLCCUG_03465 | MPHLCCUG_04389 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Ribosomal RNA small subunit methyltransferase I. | 0.497 |
| era | ybeY | MPHLCCUG_03465 | MPHLCCUG_03468 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Endoribonuclease YbeY. | 0.969 |
| era | ybeZ_1 | MPHLCCUG_03465 | MPHLCCUG_03469 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | PhoH-like protein. | 0.937 |
| hrcA | dnaJ_1 | MPHLCCUG_03472 | MPHLCCUG_03471 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | Chaperone protein DnaJ. | 0.935 |
| hrcA | era | MPHLCCUG_03472 | MPHLCCUG_03465 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.578 |
| hrcA | rsmE | MPHLCCUG_03472 | MPHLCCUG_03470 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | Ribosomal RNA small subunit methyltransferase E. | 0.749 |
| hrcA | ybeY | MPHLCCUG_03472 | MPHLCCUG_03468 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | Endoribonuclease YbeY. | 0.506 |
| hrcA | ybeZ_1 | MPHLCCUG_03472 | MPHLCCUG_03469 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | PhoH-like protein. | 0.506 |
| rlmN | rsmB | MPHLCCUG_02174 | MPHLCCUG_02925 | Putative dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | Ribosomal RNA small subunit methyltransferase B. | 0.955 |
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