STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgrD_1Linear gramicidin synthase subunit D. (1450 aa)    
Predicted Functional Partners:
eryA_1
Erythronolide synthase, modules 5 and 6.
 0.993
eryA_2
Erythronolide synthase, modules 1 and 2.
 
 0.985
AMO62279.1
MbtH-like protein.
 
 
 0.982
lgrD_2
Linear gramicidin synthase subunit D.
    
0.979
pks2
Phthioceranic/hydroxyphthioceranic acid synthase.
 0.976
ppsA_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
 0.973
eryA_3
Erythronolide synthase, modules 1 and 2.
 0.972
mbtB_1
Phenyloxazoline synthase MbtB.
 
  
 0.965
AMO59817.1
Long-chain-fatty-acid--AMP ligase FadD28.
 
 0.922
AMO63635.1
Putative fatty-acid--CoA ligase fadD21.
 
 0.914
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.