STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
irtA_1Iron import ATP-binding/permease protein IrtA. (444 aa)    
Predicted Functional Partners:
AMO62289.1
Hypothetical protein.
     0.947
irtA_2
Iron import ATP-binding/permease protein IrtA.
 
  
 0.863
irtB
Iron import ATP-binding/permease protein IrtB.
 
   
0.832
eryA_1
Erythronolide synthase, modules 5 and 6.
  
 0.796
dnaK_3
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.789
dnaK_1
Chaperone protein DnaK.
 
 0.761
eryA_2
Erythronolide synthase, modules 1 and 2.
 
 0.755
ftsH2_2
ATP-dependent zinc metalloprotease FtsH 2; Belongs to the AAA ATPase family.
 
 
 0.736
AMO61896.1
Fluoroquinolones export ATP-binding protein.
 
 0.714
kasA_1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.698
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.