STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppsA_2Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA. (1710 aa)    
Predicted Functional Partners:
mbtB_2
Phenyloxazoline synthase MbtB.
 0.954
kasA_1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
0.917
mbtB_1
Phenyloxazoline synthase MbtB.
 
 
 0.911
AMO63635.1
Putative fatty-acid--CoA ligase fadD21.
 0.904
AMO59817.1
Long-chain-fatty-acid--AMP ligase FadD28.
 0.900
lgrD_2
Linear gramicidin synthase subunit D.
 
 0.899
eryA_3
Erythronolide synthase, modules 1 and 2.
 
0.899
pks2
Phthioceranic/hydroxyphthioceranic acid synthase.
 
0.896
AMO59052.1
Long-chain-fatty-acid--AMP ligase FadD32.
 0.884
dhbF_2
Dimodular nonribosomal peptide synthase.
 
 0.884
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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