Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMO61966.1 | cshA | MPHLCCUG_03161 | MPHLCCUG_01689 | Putative ribonuclease J. | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | 0.588 |
| AMO61966.1 | deaD | MPHLCCUG_03161 | MPHLCCUG_04009 | Putative ribonuclease J. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.447 |
| AMO61966.1 | pnp | MPHLCCUG_03161 | MPHLCCUG_03179 | Putative ribonuclease J. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.853 |
| AMO61966.1 | rng | MPHLCCUG_03161 | MPHLCCUG_03595 | Putative ribonuclease J. | Ribonuclease G. | 0.816 |
| AMO61966.1 | rph | MPHLCCUG_03161 | MPHLCCUG_03878 | Putative ribonuclease J. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.500 |
| cshA | AMO61966.1 | MPHLCCUG_01689 | MPHLCCUG_03161 | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | Putative ribonuclease J. | 0.588 |
| cshA | eno | MPHLCCUG_01689 | MPHLCCUG_04356 | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.627 |
| cshA | pnp | MPHLCCUG_01689 | MPHLCCUG_03179 | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.958 |
| cshA | rng | MPHLCCUG_01689 | MPHLCCUG_03595 | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | Ribonuclease G. | 0.873 |
| cshA | rph | MPHLCCUG_01689 | MPHLCCUG_03878 | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.879 |
| cshA | rplU | MPHLCCUG_01689 | MPHLCCUG_03594 | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.594 |
| deaD | AMO61966.1 | MPHLCCUG_04009 | MPHLCCUG_03161 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Putative ribonuclease J. | 0.447 |
| deaD | eno | MPHLCCUG_04009 | MPHLCCUG_04356 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.578 |
| deaD | pnp | MPHLCCUG_04009 | MPHLCCUG_03179 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.872 |
| deaD | rng | MPHLCCUG_04009 | MPHLCCUG_03595 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Ribonuclease G. | 0.648 |
| deaD | rph | MPHLCCUG_04009 | MPHLCCUG_03878 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.830 |
| deaD | rplU | MPHLCCUG_04009 | MPHLCCUG_03594 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.594 |
| eno | cshA | MPHLCCUG_04356 | MPHLCCUG_01689 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | 0.627 |
| eno | deaD | MPHLCCUG_04356 | MPHLCCUG_04009 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.578 |
| eno | pnp | MPHLCCUG_04356 | MPHLCCUG_03179 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.843 |
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