STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpfE_1Resuscitation-promoting factor RpfE precursor. (174 aa)    
Predicted Functional Partners:
AMO62426.1
DSBA-like thioredoxin domain protein.
  
 
   0.551
rpfE_2
Resuscitation-promoting factor RpfE precursor.
 
   
0.507
AMO61698.1
ABC-2 family transporter protein.
 
     0.462
lytC_2
N-acetylmuramoyl-L-alanine amidase LytC precursor.
 
  
 0.436
AMO60636.1
Hypothetical protein.
  
 
 0.402
AMO62251.1
Hypothetical protein.
  
 
 0.402
AMO60444.1
AMP-binding enzyme.
 
     0.400
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.