STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO62428.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
AMO59669.1
Hypothetical protein.
  
 0.970
pepN_2
Aminopeptidase N.
       0.671
AMO61830.1
Preprotein translocase subunit YajC.
    
 
 0.641
AMO62430.1
HNH endonuclease.
       0.589
bmr3_3
Multidrug resistance protein 3.
  
 0.559
AMO62427.1
Hypothetical protein.
       0.495
hypF
Carbamoyltransferase HypF.
  
  
 0.436
AMO60301.1
Roadblock/LC7 domain protein.
      
 0.418
tmoS
Sensor histidine kinase TmoS.
   
 
 0.415
yhjE_1
Inner membrane metabolite transport protein YhjE.
   
 0.411
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.