STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadA_63-ketoacyl-CoA thiolase. (385 aa)    
Predicted Functional Partners:
fadJ
Fatty acid oxidation complex subunit alpha.
 
 0.995
acrC_10
Acryloyl-CoA reductase (NADH).
  
 0.943
acdA_16
Acyl-CoA dehydrogenase.
  
 0.943
caiD_3
Carnitinyl-CoA dehydratase.
  
 0.935
yngG_1
Hydroxymethylglutaryl-CoA lyase YngG.
  
 
 0.928
yngG_2
Hydroxymethylglutaryl-CoA lyase YngG.
  
 
 0.928
mmsA_1
Methylmalonate-semialdehyde dehydrogenase (acylating).
  
 0.923
mmsA_2
Methylmalonate-semialdehyde dehydrogenase (acylating).
  
 0.923
mhpF
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
 0.905
AMO59768.1
acetyl-CoA acetyltransferase.
  
 0.898
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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