STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmsA_2Methylmalonate-semialdehyde dehydrogenase (acylating). (502 aa)    
Predicted Functional Partners:
tpa_2
Taurine--pyruvate aminotransferase.
 
 
 0.980
mmsB
3-hydroxyisobutyrate dehydrogenase.
 
 
 0.965
acsA_1
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.943
acsA_3
Acetyl-coenzyme A synthetase.
  
 0.943
acsA_4
Acetyl-coenzyme A synthetase.
  
 0.943
dat
Diaminobutyrate--2-oxoglutarate aminotransferase.
  
 0.932
puuE_1
4-aminobutyrate aminotransferase PuuE.
  
 0.932
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.927
acuI
Putative acrylyl-CoA reductase AcuI.
  
 0.926
acrC_10
Acryloyl-CoA reductase (NADH).
  
  0.926
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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