Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pucR_3Purine catabolism regulatory protein. (532 aa)    
Predicted Functional Partners:
mmsA_2
Methylmalonate-semialdehyde dehydrogenase (acylating).
 
     0.604
tpa_2
Taurine--pyruvate aminotransferase.
 
     0.600
gloA
Lactoylglutathione lyase.
 
     0.574
puuB_1
Gamma-glutamylputrescine oxidoreductase.
 
     0.568
acr1_5
Fatty acyl-CoA reductase.
       0.566
AMO63222.1
Long-chain-fatty-acid--CoA ligase FadD13.
       0.566
puuB_2
Gamma-glutamylputrescine oxidoreductase.
 
     0.523
betI_5
HTH-type transcriptional regulator BetI.
  
     0.489
AMO61781.1
Hypothetical protein.
  
     0.471
plaP_1
Low-affinity putrescine importer PlaP.
  
     0.430
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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