STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO63227.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
lcfB_13
Long-chain-fatty-acid--CoA ligase.
       0.773
pitA
Low-affinity inorganic phosphate transporter 1.
 
     0.716
AMO63229.1
Pyridoxamine 5'-phosphate oxidase.
       0.653
AMO63224.1
Hypothetical protein.
 
    
0.582
AMO63225.1
Hypothetical protein.
       0.581
AMO58964.1
Hypothetical protein.
  
     0.474
AMO58963.1
Hypothetical protein.
  
     0.451
fbpB_3
Diacylglycerol acyltransferase/mycolyltransferase Ag85B precursor.
  
     0.422
AMO59890.1
Telomeric repeat-binding factor 2.
  
     0.417
fbpC_1
Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor.
  
     0.403
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.