STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO63249.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
AMO63248.1
Hypothetical protein.
 
     0.953
AMO63250.1
Hypothetical protein.
 
     0.952
AMO63246.1
Hypothetical protein.
 
   
 0.944
AMO63245.1
ATPase family associated with various cellular activities (AAA).
 
   
 0.845
AMO63247.1
Hypothetical protein.
       0.803
AMO63626.1
Hypothetical protein.
 
     0.788
AMO63627.1
Hypothetical protein.
 
     0.786
AMO63625.1
Hypothetical protein.
 
   
 0.730
clpC1_3
ATP-dependent Clp protease ATP-binding subunit ClpC1.
       0.550
AMO63244.1
Hypothetical protein.
       0.546
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.