STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccs1Cytochrome c biogenesis protein Ccs1. (511 aa)    
Predicted Functional Partners:
ccsA
Cytochrome c biogenesis protein CcsA.
 
  
 0.991
AMO63258.1
Cytochrome C biogenesis protein transmembrane region.
 
  
 0.990
resA_2
Thiol-disulfide oxidoreductase ResA.
 
  
 0.981
pspA_7
Phosphoserine phosphatase 1.
 
    0.924
hemL2
Glutamate-1-semialdehyde 2,1-aminomutase 2.
  
  
 0.822
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
 
  
 0.813
nasF
Uroporphyrinogen-III C-methyltransferase.
 
    0.779
aioB
Arsenite oxidase subunit AioB precursor.
 
   
 0.767
petB
Cytochrome b6.
 
   
 0.763
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.763
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.